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treangenlab
seqscreen
Branches
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update/installation
0a41b077
·
Add checking of output
·
Oct 13, 2019
dreycey-dev
0808c89d
·
adding updated size constraints allowing for small, medium and genome
·
Nov 29, 2019
remove-hmmscan
bd0ad13c
·
Removed hmmscan step
·
Jan 15, 2020
test-download
3bf2814b
·
Changed archive name
·
Jan 17, 2020
dreycey/adding_benchmarking_material
8e983057
·
Made classification more efficient using sparse matricies
·
Feb 24, 2020
html-report-generation
8c44c5ac
·
improve anf fix sorting table, improve loading page
·
Feb 28, 2020
!30
fungcat-65
90b3ac37
·
Modified script. View
FUNGCAT-65
for comments
·
Apr 28, 2020
dreycey/DB_update
2b6e52d0
·
updated makeblastdb to have log file, and updated README to contain troubleshooting information
·
May 04, 2020
!32
threat_explorer_bpoc_header
91700d2b
·
Merge branch 'master' into 'threat_explorer_bpoc_header'
·
Jun 12, 2020
!31
Threat-Explorer-Multiple-Pages
8951dc4a
·
Updated Comments
·
Jun 25, 2020
!33
benchmark
d5574c0b
·
Delete centrifuge.sh
·
Jul 07, 2020
IE-compatibility-updates
c1bed1a1
·
Added a loading spinner
·
Jul 13, 2020
!34
batch_fast
9ca8a5fe
·
stampede-specific updates
·
Jul 16, 2020
useDiamondID
54beed15
·
Added diamond integration to centrifuge
·
Jul 20, 2020
seqscreen-default
51099bf0
·
Rename to fit norm
·
Jul 21, 2020
fast-replace-default
8b725bdb
·
Removing default mode
·
Jul 21, 2020
!36
centrifuge
357b6346
·
Merge branch 'centrifuge' of
https://gitlab.com/treangenlab/seqscreen
into centrifuge
·
Jul 27, 2020
!37
singularity_python_version_update
64572d5f
·
Updated shebang line
·
Jul 30, 2020
!38
Python3_command_update
df4ead71
·
Updated the header alignment
·
Aug 13, 2020
!39
137-seqscreen-version-missing-in-html-report
5aa47231
·
Updated threat explorer version
·
Aug 19, 2020
!40
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